Browse of TCMCG006C60230 protein

CDS

Accession Number	TCMCG006C60230
gbkey	CDS
Protein Id	XP_013719003.1
Location	complement(join(2950930..2950971,2951067..2951153,2951259..2951333,2951423..2951539,2951638..2951721,2951947..2952012,2952164..2952229,2952476..2952547,2952635..2952736,2952823..2953000,2953149..2953204,2953515..2953622,2953697..2953765,2953852..2953960,2954152..2954240,2954341..2954415,2954775..2954897,2955116..2955235,2955325..2955405,2955480..2955626,2955722..2955800,2956333..2956407,2956550..2956659,2956747..2956845,2957157..2957272,2957359..2957467,2957545..2957763,2957858..2958123,2958460..2958617,2958709..2958862,2958946..2959012,2959239..2959268))
Gene	LOC106422766
GeneID	106422766
Organism	Brassica napus

Protein

Length	1115aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013863549.2
Definition	ubiquitin carboxyl-terminal hydrolase 12 isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTATGGTGACTCCGCCTCCCGTCGATCAAGAGGATGAGGAGATGCTTGTTCCGCATTCAGATTTGGTTGAGGATCCTGCTCAGCCTATGGAAGTTTCCGAAACTGAGACTGCTGTGAGCACTGTGGAGAATCAGCCAGCAGCTGAGGAGCCTCCCACTCTGAAATTCACGTGGACTATCCCACACTTCTCGAGGATTAACACCAGGAAGCAGTACTCCGATGTGTTTGTTGTTGGAGGTTACAAATGGCGCATATTGATTTTCCCGAAAGGGAACAATGTTGACCATTTGTCCATGTACTTGGATGTTGCTGATGCTGCGAGTTTGCCTTACGGTTGGAGCAGGTATGCTCAGTTCAGCCTGGCTGTTGTCAATCAAGTCCACACCAGATACACCATTAGAAAAGAAACGCAGCATCAATTCAACGCGAGAGAAAGCGACTGGGGATTTACGTCATTCATGCCTCTTAGCGAACTTTATGATCCGAGTAGAGGATATCTGGCGAATGATACTGTTTACATTGAAGCTGAAGTCGTTGTGCGTAAGGTTCTTGATTATTGGTCTTACGATTCCAAAAAAGAGACCGGGTTTGTTGGTCTCAAGAACCAAGGTGCAACTTGTTACATGAATTCTCTTCTACAGACACTATACCACATTCCTTACTTCAGAAAGGCTGTATACCACATGCCAACAACTGAGAACGATGCGCCTACAGCGAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAGCTCCAATATAACGACACCAGTGTTGCGACAAAAGAGCTGACAAAGTCGTTTGGTTGGGACACATATGATTCTTTCATGCAACATGATGTCCAAGAACTCAATAGAGTTCTCTGCGAGAAACTTGAGGATAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAGCTATTTGAGGGGCACCACATGAATTATATCGAGTGCATAAATGTAGATTATAAATCTACACGGAAAGAATCATTTTATGACCTTCAGCTGGATGTTAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACAAATATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATATCATGCAGAAGGACACGGATTACAGGATGCAAAAAAAGGTGTTCTTTTCATAGACTTTCCACCGGTTCTTCAGCTCCAGCTCAAAAGGTTTGAATATGACTTCATGAGGGATTCCATGGTGAAGATAAATGATCGCTATGAATTTCCGCTGGAACTGGATCTTGATAGAGAGGATGGGAAGTATTTATCCCCTGATGCTGACAGGAGTGTCCGCAACCTTTATACACTTCACAGTGTCTTAGTTCATAGTGGAGGAGTACATGGTGGGCATTATTACGCATTTATAAGGCCCACGCTCTCAGATCAATGGTATAAATTTGATGATGAACGAGTAACCAAAGAAGATTTGAAAAGGGCACTGGAGGAGCAATATGGTGGTGAAGAGGAGCTACCACAAACTAATCCTGGTTTCAATAACCCTCCTTTCAAATTCACAAAGTACTCGAATGCATATATGCTTGTATATATCCGGGAAAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAGACATTGCTGAGCACTTAAGGGTGAGGCTGAAGAAGGAACAAGAAGAAAAGGAAGACAAAAGAAAATACAAGGCACAAGCTCACCTTTTTACGATAATTAAGGTTGCAAGAGATCAAGACCTTAAGGAACAAATTGGGAAGGATATATATTTTGATCTTGTTGATCATGACAAAGTTCGCAGTTTCCGGATCCAGAAACAGACACCATTTCAACAGTTTAAGGAGGAGGTGGCCAAGGAATTTGGTATACCTGTTCAGTGTCAGAGGTTCTGGATTTGGGCAAAGCGACAAAACCATACCTATCGTCCCAATCGCCCCCTTACACCTCAGGAGGAATTACAACCGGTTGGACAAATTAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTTAAGCTGTTTTTGGAAGTAGAGCTGCTGGATGAACGTCCTATTCCTCCTCCTGAAAAATCAAAAGACGATATTCTTCTTTTCTTTAAGCTTTATGACCCCGAGAAGCCAGAGTTAAGGTATGTTGGTAGACTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAACTGGAAAACTGAATGAAATGGCTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGAAATCAAGTTTGAGCCTGGTGTTATGTGCGAACACCTAGATAAGAAAAATTCATTCAGATTGTGTCAAATCGAAGATGGAGATATCATTTGCTTTCAGAAACCTGTTGTTAACAAGGAGATTGAATGCCGCTACCCAGCTGTGCCTTTGTTTCTTGAATATGTCCAGAATCGACAGCTGGTCCGATTTCGTGCTCTGGAAAAACCTAAAGAAGATGAGTTCGTTCTGGAGTTGTCAAAGTTGCACACTTATGACGATGTCGTTGAAAGAGTGGCCGAGAAGCTTGGTCTTGACGATCCATCCAAGCTTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCCAAGCCTCAGCCTATCAAATACCGTGGAGTAGACCGTTTATCAGACATGTTGGTTCACTACAATCAGACGTCTGATATTTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTGAAAGTTGCTTTCCATCATTCCACGAAGGAGGAAGTGGTAATCCACAATATAAGACTACCTAAACAAAGCACAGTCGGAGATGTTATTAATGAACTAAAAACAAAGGTGGAGCTCTCGCATCCAGATGCAGAACTGAGAATACTCGAGGTGTTTTACCACAAGATCTACAAGATTTTTCCATTAACTGAAAGAATTGAGAATATAAACGACCAGTACTGGACTTTGCGAGCTGAGGAGATTCCGGAAGAAGAGAAAAACATTGGTCCAAATGATCGCTTAATTCTTGTGTACCACTTTGCTAAGGAAACTGGACAGAATCAGCAAGTGCAAAACTTTGGGGAGCCCTTCTTCTTGGTAATTCATGAAGGTGAAACTCTTGAAGAAATCAAGAACCGTATCCAAAAGAAGCTTCATGTATCAGATGAGGACTTTGCCAAGTGGAAGTTTGCGTTCATGTCAATGGGACGTCCGGAGTACTTGCAGGACTCAGATGTTGTTTACAATCGCTTTCAGAGGAGAGATGTCTATGGTGCTTTTGAGCAGTATCTGGGGTTGGAGCACACTGATACCACTCCTAAGAGGGCTTATGCTGCAAACCAGAACCGACACGCTTATGAGAAGCCGGTGAAGATATACAATTAG

Protein:   MTMVTPPPVDQEDEEMLVPHSDLVEDPAQPMEVSETETAVSTVENQPAAEEPPTLKFTWTIPHFSRINTRKQYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAASLPYGWSRYAQFSLAVVNQVHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLANDTVYIEAEVVVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDSMVKINDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGIPVQCQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVELLDERPIPPPEKSKDDILLFFKLYDPEKPELRYVGRLMVKSSSKPMDITGKLNEMAGFAPDEEIELFEEIKFEPGVMCEHLDKKNSFRLCQIEDGDIICFQKPVVNKEIECRYPAVPLFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDRLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHSTKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYHKIYKIFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYGAFEQYLGLEHTDTTPKRAYAANQNRHAYEKPVKIYN